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Civil-Comp Proceedings
ISSN 1759-3433
CCP: 95
Edited by: P. Iványi and B.H.V. Topping
Paper 58

An Efficient Scalable Solver for the Global Ocean Sea-Ice Model MPIOM

F. Wilhelm1, P. Adamidis2 and V. Heuveline1

1Engineering Mathematics and Computing Lab, Karlsruhe Institute of Technology, Germany
2Scientific Computing, Deutsches Klimarechenzentrum GmbH, Hamburg, Germany

Full Bibliographic Reference for this paper
F. Wilhelm, P. Adamidis, V. Heuveline, "An Efficient Scalable Solver for the Global Ocean Sea-Ice Model MPIOM", in P. Iványi, B.H.V. Topping, (Editors), "Proceedings of the Second International Conference on Parallel, Distributed, Grid and Cloud Computing for Engineering", Civil-Comp Press, Stirlingshire, UK, Paper 58, 2011. doi:10.4203/ccp.95.58
Keywords: high-performance computing, successive-over-relaxation, conjugate gradient method, incomplete Cholesky decomposition, MPIOM, climate simulation, mathematical modeling, ocean model, barotropic subsystem.

In this work we present some results of the "Scalable-Earth-System-Models for high productivity climate simulations" (ScalES) project funded by the German Bundesministerium für Bildung und Forschung (BMBF No. 01IH08004E). We show the efforts of improving the linear solver of the barotropic subsystem [3], discretized by finite differences, in the MPIOM by means of modern mathematical methods.

The traditional solver uses the successive-over-relaxation (SOR) method with red-black numbering and a relaxation parameter that is estimated by a number of test calculations and measurements of the rate of convergence. We implemented the conjugate gradient (CG) method with several preconditioners, most notably incomplete Cholesky decomposition with fill-in p (ICC(p)). We demonstrate different aspects of the implementation, especially all challenges in parallelization and exploitation of the IBM POWER6 architecture [4] to achieve high scalability.

The CG method is then used in combination with several preconditioners to solve the barotropic subsystem in MPIOM and compared to SOR in terms of the number of iterations and runtime. We conclude that the CG method with an appropriate preconditioner such as ICC(p) greatly reduces the necessary number of iterations, communication and eventually the runtime, even compared with the SOR method with a highly optimized relaxation parameter. Finally we discuss possible ways of further improvement with respect to the obtained results.

S. Marsland, H. Haak, J. Jungclaus, M. Latif, F. Röske, "The Max-Planck-Institute Global Ocean/Sea Ice Model with Orthogonal Curvilinear Coordinates", Ocean Modelling, 5, 91-127, 2003. doi:10.1016/S1463-5003(02)00015-X
A. Arakawa, V. Lamb, "Computational Design of the Basic Dynamical Processes of the UCLA General Circulation Model", Methods in Computational Physics, 17, 173-265, 1977.
E. Simonnet, T.T. Medjo, R. Temam, "Barotropic-Baroclinic Formulation of the Primitive Equations of the Ocean", Applicable Analysis, 82(5), 439-456, 2003. doi:10.1080/0003681031000094591
H.Q. Le, W.J. Starke, J.S. Fields, F.P. O'Connell, D.Q. Nguyen, B.J. Ronchetti, W.M. Sauer, E.M. Schwarz, M.T. Vaden, "IBM POWER6 microarchitecture", IBM J. Res. Dev., 51(6), 639-662, 2007. doi:10.1147/rd.516.0639

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